Structure of PDB 6j55 Chain F Binding Site BS01

Receptor Information
>6j55 Chain F (length=196) Species: 5755 (Acanthamoeba castellanii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LFTLNDPAYLKTGLEPAISAKTLDFHFNGHHKTYLNKTNDLVKGTSLENK
SLEDVILVAKTTNNAALFNNATQLWNHSFFWDCMAPTNQTGQISPELEKL
IKESFGSVADFKKKFTDSAIANFGSGWTWLVNINGKLEIQNTSNAESPVT
LRVTPLLTVDVWEHAYYLDHQNRRPEYLNKWWEVVNWKFVDQQLKQ
Ligand information
Ligand IDFE2
InChIInChI=1S/Fe/q+2
InChIKeyCWYNVVGOOAEACU-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Fe+2]
CACTVS 3.341[Fe++]
FormulaFe
NameFE (II) ION
ChEMBL
DrugBankDB14510
ZINC
PDB chain6j55 Chain F Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6j55 Crystal structure of an iron superoxide dismutase from the pathogenic amoeba Acanthamoeba castellanii.
Resolution2.33 Å
Binding residue
(original residue number in PDB)
H27 H78 D161 H165
Binding residue
(residue number reindexed from 1)
H26 H77 D160 H164
Annotation score1
Enzymatic activity
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0004784 superoxide dismutase activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process
GO:0019430 removal of superoxide radicals

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6j55, PDBe:6j55, PDBj:6j55
PDBsum6j55
PubMed31282867
UniProtQ5IZD9

[Back to BioLiP]