Structure of PDB 5zc0 Chain F Binding Site BS01

Receptor Information
>5zc0 Chain F (length=281) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DMNYGYRSCNEIKSSDSRAPDGIYTLATEDGESYQTFCDMTTNGGGWTLV
ASVHENNMFGKCTVGDRWSTQQGNMLQNPEGDGNWANYATFGLPEGATSD
DYKNPGYYDIEAKNLALWHVPNKTPMVMWRNSSILRYRTQNGFLTEEGGN
LFELYKKYPVKYDIGKCLADNGPAVPVVYDLGSAEKTASLYSPNGRSEFT
PGFVQFRAVNSERATLALCAGVKVKGCNVEHHCIGGGGYIPEGSPRQCGD
FAALDWDGYGTNLGWSASKQIIEAAVMLFYR
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5zc0 Chain F Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5zc0 Structural stabilities of calcium proteins: Human intelectin-1 and frog lectin XEEL
Resolution2.75 Å
Binding residue
(original residue number in PDB)		E116 N118 G121 D127
Binding residue
(residue number reindexed from 1)		E55 N57 G60 D66
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
GO:0070492 oligosaccharide binding
Biological Process
GO:0034214 protein hexamerization
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0030133 transport vesicle
GO:0030141 secretory granule
GO:0031410 cytoplasmic vesicle

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5zc0, PDBe:5zc0, PDBj:5zc0
PDBsum5zc0
PubMed29807191
UniProtQ5PPM0|ITLN1_XENLA Intelectin-1 (Gene Name=itln1)

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