Structure of PDB 5t61 Chain F Binding Site BS01

Receptor Information

>5t61 Chain F (length=345) Species: 145261 (Methanothermobacter wolfeii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TTEVIEGKNITVERTGNRRLIFQDCLCAVCGLCGEICPVSAIEVNPTGAM
VRTEQEKSKIAIDENKCVLCGMCSSICPFQALDLQIDGTSIKELAEYPKI
IKSAEIDDETCIQCKACETACPQDAITITRELPERKDLVTGEIEIDKDTC
IYCGMCEEMCPVDAIEIDHQTPSSASPVVATDIRVDEDKCVHCGICKRIC
PVDAIMQVCRICPYGEYEIKTPEVTGTSYIDPELCVNCGWCQEICPVDAA
TVTKPFEGELIIDQDTCQACETCVMVCPCNVLSFPKPEKPGEKTTKLHKD
ERFCIYCGACERSCPVTAITVKRNRINTTPIRSKAWKNAFDSLLK

Ligand information

InChI=1S/4Fe.4S

LJBDFODJNLIPKO-UHFFFAOYSA-N

SMILES

Software	SMILES
OpenEye OEToolkits 2.0.7	[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385	S1[Fe]S[Fe]1.S2[Fe]S[Fe]2

Formula

Fe4 S4

Name

IRON/SULFUR CLUSTER

ChEMBL

DrugBank

ZINC

PDB chain

5t61 Chain F Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5t61 The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.
Resolution	2.55 Å
Binding residue (original residue number in PDB)	L264 C281 V285 C308 Y310 C311 G312 C314
Binding residue (residue number reindexed from 1)	L260 C277 V281 C304 Y306 C307 G308 C310
Annotation score	4

External links

PDB	RCSB:5t61, PDBe:5t61, PDBj:5t61
PDBsum	5t61
PubMed	27846502

[Back to BioLiP]