Structure of PDB 5h0r Chain F Binding Site BS01

Receptor Information
>5h0r Chain F (length=1183) Species: 110829 (Bombyx mori cypovirus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LHNTIFSETRKFTRESFKEIEHLTARLANDSVARHDFLFNTSIALISDYS
GEDSNGNQLQATITIPNEIINPKEYDPSDYPLAEDESFFKQGHKYDYLVT
FRAGSLTNTYEPKTKMYKLHAALDKLMHVRQRKSRFADLWRELCAVIASL
DVWYQTTNYPLRTYVKLLFHRGDEFPFYESPSQDRIIFNDKSVASILPTF
VYTCCQVGTAIMSGILTHVESIVAMNHFLHCAKDSYIDEKLKIKGIGRSW
YQEALHNVGQATVPVWSQFNEVIGHRRKSTSEPHFVSSTFISLRAKRAEL
LYPEFNAYINRAIQLSKTQNDVANYYAACRAMTNDGTFLATLTELSLDAA
VFPRIEQRLVTRPAVLMSNTRHESLKQKYTNGVGSIAQSYLSSFTDEIAK
RVNGIHHDEAWLNFLTTSIVMQAVFAREYRTPERIFKSLKAPIKLVERQQ
SDRRQRAISGLDNDRLFLSFMPYTIGKQIYELNDNAAQGKQAGNAFDIGE
MLYWTSQRNVLLSSIDVAGMDASVTTNTKDIYNTFVLDVASKCTVPRFGP
YYAKNMEVFEVGKRQSQVRYVNAAWQACALEAADSQTSTSYESEIFGQVK
NAEGTYPSGRADTSTHHTVLLQGLVRGNELKRASDGKNSCLATIKILGDD
IMEIFQGSESDTYDHAMSNANILNESGFATTAELSQNSIVLLQQLVVNGT
FWGFADRISLWTREDTKDIGRLNLAMMELNALIDDLVFRVRRPEGLKMLG
FFCGAICLRRFTLSVDNKLYDSTYNNLSKYMTLIKYDKNPDFDSTLMSLI
LPLAWLFMPRGGEYPAYPFERRDGTFTEDESMFTARGAYKRRLLYDVSNI
REMIQQNSMALDDDLLHEYGFTGALLLIDLNILDLIDEVKKEDISPVKVS
ELATSLEQLGKLGEREKSRRAASDLKIRGHALSNDIVYGYGLQEKIQKSA
MAKRVSSRLHDVIVAKTRDYKISTIPADALRLHEFEVEDVTVDLLPHAKH
TSYSSLAYNMSFGSDGWFAFALLGGLDRSANLLRLDVASIRGNYHKFSYD
DPVFKQGYKIYKSDATLLNDFFTAISAGPKEQGILLRAFAYYSLYGNVEY
HYVLSPRQLFFLSDNPVSAERLVRIPPKYYVSTQCRALYNIFSYLHILRS
IANNWGKRLKMVLHPGLIAYVRGTSQGAILPEA
Ligand information
>5h0r Chain H (length=42) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5h0r Near-Atomic Resolution Structure Determination of a Cypovirus Capsid and Polymerase Complex Using Cryo-EM at 200kV
Resolution3.9 Å
Binding residue
(original residue number in PDB)		N912 A962 Q1095
Binding residue
(residue number reindexed from 1)		N881 A931 Q1056
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003968 RNA-dependent RNA polymerase activity
Biological Process
GO:0001172 RNA-templated transcription
GO:0019079 viral genome replication

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Molecular Function
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Biological Process
External links
PDB RCSB:5h0r, PDBe:5h0r, PDBj:5h0r
PDBsum5h0r
PubMed27914893
UniProtA0A0S1LIW6

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