Structure of PDB 4yf9 Chain F Binding Site BS01

Receptor Information
>4yf9 Chain F (length=575) Species: 1268622 (Acidovorax sp. MR-S7) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SNMYGFGTAATGEGSGVLFGNPHWYWKGPDRFYQAQLTIDGEANVSGVSF
LGLPVIQIGFNDSVAWSHTVSTARRFGFFQLSLVQGEPTSYLRDGVPVKM
KPATITVPSRNADGSVSDVTRTLYHSEFGPLVNLAGLNPALAWSQGTAFA
IRDINGENFRTLRTWMRWNQAKSLDEFIAIQKEEASIPWVNTVAVGRGSA
KAWYADIGAVPNVSPAQTAACTTPFGMAVGQALPNVPFFDGSRSECDWLT
DADSVQKGAVGVSRMPSLQRDDYVGNMNDSYWLANVHAPLTGYPAIFGPA
GTSAQTLRTRMGHTMALERLAGTDGYAGNKATSAVVREMVLGSRVFSAER
FKDEVLDLICTPAQWTVNGAAVDAAQACAVLAAWDNRGRKDSRGSHLWDE
FWSRVPTASLFTVPFSAADPLNTPRGINAAAADALRQAMATAIARVGQSG
YALDAPRGEVLYATRGGTRLPLYGGCGAMGYFTITCSENDITQGGYSMDG
QPNASNSYMQVVSFPASGVQAHTFLTFSLSDDPASPHHGDYTKAYSAGQW
LRVPFTEAEITGNADYRTATVKELE
Ligand information
>4yf9 Chain E (length=14) Species: 1268622 (Acidovorax sp. MR-S7) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
FEPGRTRAPSLQVG
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4yf9 Bifunctional quorum-quenching and antibiotic-acylase MacQ forms a 170-kDa capsule-shaped molecule containing spacer polypeptides
Resolution2.6 Å
Binding residue
(original residue number in PDB)
V70 F76 L137 N138 P139 L141 W189 A228
Binding residue
(residue number reindexed from 1)
V70 F76 L137 N138 P139 L141 W189 A228
Enzymatic activity
Catalytic site (original residue number in PDB) S1 H23 V70 N278 N506
Catalytic site (residue number reindexed from 1) S1 H23 V70 N278 N506
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
Biological Process
GO:0017000 antibiotic biosynthetic process

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Molecular Function

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Biological Process
External links
PDB RCSB:4yf9, PDBe:4yf9, PDBj:4yf9
PDBsum4yf9
PubMed28827579
UniProtA0A0A1VBK6

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