Structure of PDB 3vpb Chain F Binding Site BS01

Receptor Information
>3vpb Chain F (length=56) Species: 273063 (Sulfurisphaera tokodaii str. 7) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MVVLKCPVCNGDVNVPDDALPGEIVEHECGAQLEVYNDHGRLALRLAEQV
GEDWGE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3vpb Chain F Residue 100 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3vpb Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus
Resolution1.8 Å
Binding residue
(original residue number in PDB)		C6 C9 H27 C29
Binding residue
(residue number reindexed from 1)		C6 C9 H27 C29
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0006526 L-arginine biosynthetic process
GO:0009085 lysine biosynthetic process
GO:0019878 lysine biosynthetic process via aminoadipic acid

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3vpb, PDBe:3vpb, PDBj:3vpb
PDBsum3vpb
PubMed23434852
UniProtQ976J8|LYSW_SULTO Alpha-aminoadipate/glutamate carrier protein LysW (Gene Name=lysW)

[Back to BioLiP]