Structure of PDB 3qym Chain F Binding Site BS01
Receptor Information
>3qym Chain F (length=195) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SPSNTDYPGPHSFDVSFQQSSTAKSATWTYSTELKKLYCQIAKTCPIQIK
VMTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNEGQIAPPSHL
IRVEGNSHAQYVEDPITGRQSVLVPYEPPQVGTEFTTVLYNFMCNSSCVG
GMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSI
Ligand information
>3qym Chain N (length=10) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aaacatgttt
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3qym
Structures of p63 DNA binding domain in complexes with half-site and with spacer-containing full response elements.
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
R304 A307 R311
Binding residue
(residue number reindexed from 1)
R179 A182 R186
Binding affinity
PDBbind-CN
: Kd=11.7uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000976
transcription cis-regulatory region binding
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0006915
apoptotic process
Cellular Component
GO:0005634
nucleus
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3qym
,
PDBe:3qym
,
PDBj:3qym
PDBsum
3qym
PubMed
21464285
UniProt
Q9H3D4
|P63_HUMAN Tumor protein 63 (Gene Name=TP63)
[
Back to BioLiP
]