Structure of PDB 3ogm Chain F Binding Site BS01

Receptor Information
>3ogm Chain F (length=568) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCY
TATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNL
RQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVT
HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKD
LETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPE
KYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHC
TLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDE
EGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV
LLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQY
SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTK
LPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRREHPAHILAYYSL
AGQRTDCPTTVRVLKEPI
Ligand information
>3ogm Chain S (length=18) Species: 3702 (Arabidopsis thaliana) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ELPIARRASLHRFLEKRK
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3ogm Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor.
Resolution3.34 Å
Binding residue
(original residue number in PDB)		M88 F89 N90 E173 M201 E203 Y279 Y302 R326 E350 R351 G352 E359 D414 Y472 R496 G497
Binding residue
(residue number reindexed from 1)		M77 F78 N79 E162 M190 E192 Y268 Y291 R315 E339 R340 G341 E348 D403 Y461 R485 G486
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005515 protein binding
Biological Process
GO:0006952 defense response
GO:0009611 response to wounding
GO:0009625 response to insect
GO:0009641 shade avoidance
GO:0009753 response to jasmonic acid
GO:0009861 jasmonic acid and ethylene-dependent systemic resistance
GO:0009867 jasmonic acid mediated signaling pathway
GO:0009901 anther dehiscence
GO:0009909 regulation of flower development
GO:0010118 stomatal movement
GO:0010218 response to far red light
GO:0016567 protein ubiquitination
GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031348 negative regulation of defense response
GO:0042742 defense response to bacterium
GO:0048364 root development
GO:0048443 stamen development
GO:0050832 defense response to fungus
GO:0106167 extracellular ATP signaling
Cellular Component
GO:0019005 SCF ubiquitin ligase complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3ogm, PDBe:3ogm, PDBj:3ogm
PDBsum3ogm
PubMed20927106
UniProtO04197|COI1_ARATH Coronatine-insensitive protein 1 (Gene Name=COI1)

[Back to BioLiP]