Structure of PDB 2ak4 Chain F Binding Site BS01

Receptor Information
>2ak4 Chain F (length=276) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAP
WIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG
CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAA
RVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRWEP
Ligand information
>2ak4 Chain H (length=13) Species: 10377 (Human herpesvirus 4 strain B95-8) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
LPEPLPQGQLTAY
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2ak4 T cell receptor recognition of a 'super-bulged' major histocompatibility complex class I-bound peptide
Resolution2.5 Å
Binding residue
(original residue number in PDB)		Y7 N63 I66 F67 T69 T73 Y74 S77 Y84 R97 Y99 S116 T143 W147 R156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)		Y7 N63 I66 F67 T69 T73 Y74 S77 Y84 R97 Y99 S116 T143 W147 R156 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:2ak4, PDBe:2ak4, PDBj:2ak4
PDBsum2ak4
PubMed16186824
UniProtP01889|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

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