Structure of PDB 1zm4 Chain F Binding Site BS01
Receptor Information
>1zm4 Chain F (length=207) Species:
287
(Pseudomonas aeruginosa) [
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EFLGDGGDVSFSTRGTQNWTVERLLQAHRQLEERGYVFVGYHGTFLEAAQ
SIVFGGVRARSQDLDAIWRGFYIAGDPALAYGYAQDQEPDARGRIRNGAL
LRVYVPRSSLPGFYRTSLTLAAPEAAGEVERLIGHPLPLRLDAITGPEEE
GGRLETILGWPLAERTVVIPSAIPTDPRNVGGDLDPSSIPDKEQAISALP
DYASQPG
Ligand information
Ligand ID
TAD
InChI
InChI=1S/C20H27N7O13P2S/c21-16-10-18(24-4-23-16)27(5-25-10)20-14(31)12(29)9(40-20)2-38-42(35,36)6-41(33,34)37-1-8-11(28)13(30)15(39-8)19-26-7(3-43-19)17(22)32/h3-5,8-9,11-15,20,28-31H,1-2,6H2,(H2,22,32)(H,33,34)(H,35,36)(H2,21,23,24)/t8-,9-,11-,12-,13-,14-,15-,20-/m1/s1
InChIKey
CRWWKLKZKYLFQV-HVIRUEHBSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1c(nc(s1)C2C(C(C(O2)COP(=O)(CP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1csc(n1)[CH]2O[CH](CO[P](O)(=O)C[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
ACDLabs 10.04
O=P(O)(OCC3OC(n1c2ncnc(N)c2nc1)C(O)C3O)CP(=O)(O)OCC5OC(c4nc(cs4)C(=O)N)C(O)C5O
OpenEye OEToolkits 1.5.0
c1c(nc(s1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@](=O)(C[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1csc(n1)[C@@H]2O[C@H](CO[P@](O)(=O)C[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
Formula
C20 H27 N7 O13 P2 S
Name
BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE
ChEMBL
DrugBank
ZINC
ZINC000024536476
PDB chain
1zm4 Chain F Residue 702 [
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Receptor-Ligand Complex Structure
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PDB
1zm4
Exotoxin A-eEF2 complex structure indicates ADP ribosylation by ribosome mimicry.
Resolution
2.9 Å
Binding residue
(original residue number in PDB)
H440 G441 T442 A446 S449 I450 V455 R456 R458 Y470 I471 Y481 E553
Binding residue
(residue number reindexed from 1)
H42 G43 T44 A48 S51 I52 V57 R58 R60 Y72 I73 Y83 E155
Annotation score
2
Enzymatic activity
Catalytic site (original residue number in PDB)
E553
Catalytic site (residue number reindexed from 1)
E155
Enzyme Commision number
2.4.2.36
: NAD(+)--diphthamide ADP-ribosyltransferase.
Gene Ontology
Molecular Function
GO:0047286
NAD+-diphthamide ADP-ribosyltransferase activity
View graph for
Molecular Function
External links
PDB
RCSB:1zm4
,
PDBe:1zm4
,
PDBj:1zm4
PDBsum
1zm4
PubMed
16107839
UniProt
P11439
|TOXA_PSEAE Exotoxin A (Gene Name=eta)
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