Structure of PDB 6yxx Chain EG Binding Site BS01

Receptor Information
>6yxx Chain EG (length=154) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NIKGGVGSFLMRRAAPKSIRQKYQTGPQFYKRKFFQFQKGHHRLHRRISG
VQTGSPTHQREYERFHHLPGDVRTRPQFDFTFGETRADRVMFAWRKRGDL
QLYQMSGRGETFVCYRCGYPVRSQLVAVKADNWDYRMCYRCYTNTVHRGM
ENDT
Ligand information
>6yxx Chain AA (length=904) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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.........................................>>.>.....
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...........<<....>>.............<<<....<<<<<<.....
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.................>>>>>>.......>>>.................
.......<<<<<<<<..........>>>>>>>>.................
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.................<<<<<<.................>>>>>>....
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.................>>>...>>>.>>>.......<<<<<.......>
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....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6yxx Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis.
Resolution3.9 Å
Binding residue
(original residue number in PDB)		N3 K5 S10 R14 R15 K19 S20 R22 Q23 Y25 Q26 G28 Q30 F31 Y32 K33 R34 K35 F36 Q38 K41 G42 H43 H44 R45 R48 R49 S51 G52 Q54 E65 R66 H68 R77 G109 R110 R118 Y121 Q126 N146 R150
Binding residue
(residue number reindexed from 1)		N1 K3 S8 R12 R13 K17 S18 R20 Q21 Y23 Q24 G26 Q28 F29 Y30 K31 R32 K33 F34 Q36 K39 G40 H41 H42 R43 R46 R47 S49 G50 Q52 E63 R64 H66 R75 G107 R108 R116 Y119 Q124 N144 R148
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6yxx, PDBe:6yxx, PDBj:6yxx
PDBsum6yxx
PubMed32679035
UniProtQ387S8

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