Structure of PDB 8ckb Chain E493 Binding Site BS01

Receptor Information
>8ckb Chain E493 (length=456) Species: 2301731 (Bacteroides phage crAss001) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AGKLGKFQMLGFQHWAPQKATNLMVQLLAFYRGKSLDTFLNSFPTREFED
DNEYYWDVIGSSRRNIPLVEARDENGVVVAANAANVGVGTSPFYLVFPED
WFADGEVIVGNLNQVYPFRILGDARMEGTNAVYKVELMGGNTQGVPAERL
QQGERFSIEFAPVEKELSRKVGDVRFTSPVSMRNEWTTIRIQHKVGNKLN
KKLAMGIPMVRNLWMHYVDWEVELQFDEYKNNAMAWGTSNRNLNGEYMNF
GKSGNAIKTGAGIFEQTEVANTMYYNTFSLKLLEDALYELSASKLAMDDR
LFVIKTGERGAIQFHKEVLKTVSGWTTFVLDNNSTRVVEKVQSRLHSNAL
SAGFQFVEYKAPNGVRVRLDVDPFYDDPVRNKILHPMGGVAFSYRYDIWY
IGTMDQPNIFKCKIKGDNEYRGYQWGSAVIHRMATLGVCVLDPTRTMSLI
PAILQG
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8ckb Chain E493 Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ckb Structural atlas of the most abundant human gut virus
Resolution4.39 Å
Binding residue
(original residue number in PDB)		T296 A299 P491 T494
Binding residue
(residue number reindexed from 1)		T267 A270 P443 T446
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:8ckb, PDBe:8ckb, PDBj:8ckb
PDBsum8ckb
PubMed
UniProtA0A385DVU6|CAPSD_BPCA1 Major capsid protein (Gene Name=crAss001_32)

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