Structure of PDB 8xqw Chain E Binding Site BS01
Receptor Information
>8xqw Chain E (length=868) Species:
3055
(Chlamydomonas reinhardtii) [
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SLTAERFITDAKELNATGSGLPIIDGPDWEEQHWAALKAMSAGRPVALPT
PHAKFGPEDLQRIAASGPRLEDLTLEHAERLAGPGQLPTAPDGVALAFRY
IPRSVLGDFRQEVEPDWRSLPAMSPAELYAGLRARNWTSAHYDPAAEPWR
LQVFSCDYKHTGVTGWPGYRVVVTSRGGRRRWVDLAEEGELVQLTEQAPP
ASPADIGYSHVFAQLYQAYEPRYSPEALAALYGSSSSKGKAAAAAAAQHD
TPALRHLDVSYHGTGSAVAPGSGTAFLMQPSWDAVTGAIRWGLERSGLPE
LRALRDSLLPEEARKEGLTGVEFRDVAGLGPILNEVVEVVEFLKDPGTFS
KLGARPPKGILLEGDPGTGKTLLAKALAGEAMVPFYQMSGTEFTEGIVGL
GAARVRDLFKRARATAPCVIFVDEIDALGLRRAENDSAKTNEEREQTLNQ
LLTEMDGFTPDTGVVFLGATNRADLLDPALMRPGRFDRKIRMPKPDTEGR
LEILKLHLRNKQVAPDVDLLQLARDLPGLVGADLANIVNEAAMTAVRSGR
QQLTARDIYAGVDRFTQGEVRPSLPTAHKLPVLCFAAKEIGIALVAGELR
DRYGRVELVERVSIQPKGRAYSRTMFQRGTDEEYQLMTRGRLLDRIRLAL
AGGFAVRTALGEETNFTAADIKRATRMAKKYVFYYGFSEAGGAGITTWAN
QPYSGDFVIGQQRARKVVSTDAMDAFADWPTVSEDFRFDAPSPSDVTWHR
YTDEVRRVLKGCSEDVLGILAERQEAMWAGIKALSDRKELLGSELRDIFD
AHPAATSRDRDARAELAAAKLDMTIFTEGANSRWPYGIEWLDDAYPKPYW
VQQQEAEAAEAQAKQPAA
Ligand information
Ligand ID
ANP
InChI
InChI=1S/C10H17N6O12P3/c11-8-5-9(13-2-12-8)16(3-14-5)10-7(18)6(17)4(27-10)1-26-31(24,25)28-30(22,23)15-29(19,20)21/h2-4,6-7,10,17-18H,1H2,(H,24,25)(H2,11,12,13)(H4,15,19,20,21,22,23)/t4-,6-,7-,10-/m1/s1
InChIKey
PVKSNHVPLWYQGJ-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(NP(=O)(O)O)O)O)O)N
CACTVS 3.370
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)N[P](O)(O)=O)[CH](O)[CH]3O
CACTVS 3.370
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)N[P](O)(O)=O)[C@@H](O)[C@H]3O
ACDLabs 12.01
O=P(O)(O)NP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.7.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(NP(=O)(O)O)O)O)O)N
Formula
C10 H17 N6 O12 P3
Name
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
ChEMBL
CHEMBL1230989
DrugBank
ZINC
ZINC000008660410
PDB chain
8xqw Chain E Residue 1001 [
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Receptor-Ligand Complex Structure
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PDB
8xqw
Conservation and specialization of the Ycf2-FtsHi chloroplast protein import motor in green algae.
Resolution
2.9 Å
Binding residue
(original residue number in PDB)
P478 G479 T480 G481 K482 T483 H619
Binding residue
(residue number reindexed from 1)
P366 G367 T368 G369 K370 T371 H507
Annotation score
4
External links
PDB
RCSB:8xqw
,
PDBe:8xqw
,
PDBj:8xqw
PDBsum
8xqw
PubMed
39197449
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