Structure of PDB 8u3k Chain E Binding Site BS01

Receptor Information
>8u3k Chain E (length=669) Species: 666 (Vibrio cholerae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QGPLSTLIEQISIDTDWVRSFAIYCVSYKGIDFSERPKRLVTLASETYKS
GSVYCLVKGANKEACYWVLLPKDSKLDLKDTSLAIKPSSAAELPTWQLAR
LLIKAIPKVLSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEIDL
APCAALGFKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKL
VSKSIKGDYIKKPLYSNAKNRIQAIDITKESYSGFQLSKVGILEQFMQDL
KQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLT
ENQDTDAALTLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEED
PYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLKELLIKLEVHTR
KHLIEYPSGPERCVYYMPQRPRDEPWPVYASKLVGDEWQYTQATQEELED
IELDLGNDKRHVFHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAER
LRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDDVAPLPFDE
FSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQG
MYFAGGKGSPQSKIETFSHLYLIKHSFDALPEEVENLFDVYHLRHRLPTV
TPYPFKHLREYVEMQRFRS
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8u3k Plasmid targeting and destruction by the DdmDE bacterial defence system.
Resolution2.5 Å
Binding residue
(original residue number in PDB)
V52 S56 Y59 V68 K69 R111 S133 F199 I216 R232 Y293 R386 Q387 R392 H393 R431 K625 Q629 E633 H663 R664
Binding residue
(residue number reindexed from 1)
V41 S45 Y48 V57 K58 R100 S122 F188 I205 R221 Y282 R375 Q376 R381 H382 R420 K607 Q611 E615 H645 R646
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