Structure of PDB 8s9t Chain E Binding Site BS01

Receptor Information
>8s9t Chain E (length=677) Species: 1148 (Synechocystis sp. PCC 6803) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NFHNPYNFVPALPRDGITGDLGDCAPAGHSYYHGDKYSGRIAVKLTTVTP
LLIPDASKEEINNNHKTYPVRIGKDGKPYLPPTSIKGMLRSAYEAVTNSR
LAVFEDHDSRLAYRMPATMGLQMVPARIEGDNIVLYPGTSRIGNNGRPAN
NDPMYAAWLPYYQNRIAYDMAEHGDHVRFWAERYTRGNFCYWRVRQIARH
NQNLGNRPERGRNYGQHHSTGVIEQFEGFVYKTNKNIGNKHDERVFIIDR
ESIEIPLSRDLRRKWRELITSYQEIHKKEVDRGDTGPSAVNGAVWSRQII
ADESERNLSDGTLCYAHVKKEDGQYKILNLYPVMITRGLYEIAPVDLLDE
TLKPATDKKQLSPADRVFGWVNQRGNGCYKGQLRIHSVTCQHDDAIDDFG
NQNFSVPLAILGQPKPEQARFYCADDRKGIPLEDGYDRDDGYSDSEQGLR
GRKVYPHHKGLPNGYWSNPTEDRSQQAIQGHYQEYRRPKKDGLEQRDDQN
RSVKGWVKPLTEFTFEIDVTNLSEVELGALLWLLTLPDLHFHRLGGGKPL
GFGSVRLDIDPDKTDLRNGAGWRDYYGSLLETSQPDFTTLISQWINAFQT
AVKEEYGSSSFDQVTFIKASGQSLQGFHDNASIHYPRSTPEPKPDGEAFK
WFVANEKGRRLALPALEKSQSFPIKPS
Ligand information
>8s9t Chain F (length=37) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acugaaacuguaguagaaccaaucggggucgucaaua
.....................................
Receptor-Ligand Complex Structure
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PDB8s9t RNA targeting and cleavage by the type III-Dv CRISPR effector complex.
Resolution2.52 Å
Binding residue
(original residue number in PDB)		Y118 P166 T195 S196 K198 G199 R202 S203 R226 W270 R304 T351 N354 I355 N357 K358 H359 R362 Y390 H394 A407 S414 V451 I453 R455 G487 W488 V489 Y497 G499 I528 L529 G530 Q531 P532 K533 Q536 Y540 Y573 R619 G663 G664 G665 K666 P667 Y753 G764 A766 F767 F770
Binding residue
(residue number reindexed from 1)		Y6 P54 T83 S84 K86 G87 R90 S91 R114 W158 R186 T233 N236 I237 N239 K240 H241 R244 Y272 H276 A289 S296 V333 I335 R337 G369 W370 V371 Y379 G381 I410 L411 G412 Q413 P414 K415 Q418 Y422 Y455 R501 G545 G546 G547 K548 P549 Y635 G646 A648 F649 F652
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

View graph for
Biological Process
External links
PDB RCSB:8s9t, PDBe:8s9t, PDBj:8s9t
PDBsum8s9t
PubMed38637512
UniProtQ6ZED5

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