Structure of PDB 8k28 Chain E Binding Site BS01
Receptor Information
>8k28 Chain E (length=302) Species:
979527
(Vibrio phage ICP1_2004_A) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TKLKAPAVLAYSRKINPTNALMFAVNWSDRDNTTAVMVGTKTVAGTQSVR
GNPNDADKGNIQTVNFANLPHNKNTLLVKYNVKFVGDVFKAELGGGEYSN
TLQTALENTDFGTLAYRYVYNIAAGRTLWRNRVGAESIETVITVNDQTFT
FSDLLVNEFDEDVDVAEIADMVAGVLSGEGFVTLKVEHYMLLGEGSEVFP
SQEFVENSKLSKQLFDLNGQAAMHDQKIGNAIRTIDTWYEDATTPIAVEP
YGSVVRNGVAYRAGNKTDLFTLMDGAVNGKSLTEEDQMFVTANLIRGGVF
GG
Ligand information
>8k28 Chain Q (length=33) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
taagcaaagggttgacgaaagccctttgtccct
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8k28
Structure of csy complex with long DNA State1
Resolution
3.54 Å
Binding residue
(original residue number in PDB)
V50 N61 Q63 S212 V300
Binding residue
(residue number reindexed from 1)
V49 N60 Q62 S211 V299
External links
PDB
RCSB:8k28
,
PDBe:8k28
,
PDBj:8k28
PDBsum
8k28
PubMed
UniProt
F1D5V6
[
Back to BioLiP
]