Structure of PDB 8k24 Chain E Binding Site BS01

Receptor Information

>8k24 Chain E (length=295) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MQKQILTSQKRNMYILSRCKVLVKNGQVCHLHEDGNVYTVPYANTVFIGL
AEGTSITNEAMSMLAANGVIVFWTKGGGYDMFAADIICHLPQADYRPTKY
MQNWVRLWLDEEKKLSAAKEILKMRVDSLSTHVHDFGVDVENKRVSSIVN
KFDKGVTQATSFESLLGHEGTFVKSLYKEYALEYEIEFKRDHKSADNYNK
FLTLGNYYAYGIARSSLWALGIDNSFPLLHGSTRRGGLVFDVADIIKTSI
ILPLAFHAADQGMSNTEFKRSCVAYFDKNDILAYLINNIKRLCME

Ligand information

>8k24 Chain U (length=21) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

agcaatttaaatagggaagat

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8k24 Structure of csy complex with long DNA State2
Resolution	3.72 Å
Binding residue (original residue number in PDB)	R18 E52 K75
Binding residue (residue number reindexed from 1)	R18 E52 K75

Gene Ontology

	Molecular Function
GO:0003677	DNA binding
GO:0004519	endonuclease activity
GO:0046872	metal ion binding

	Biological Process
GO:0051607	defense response to virus

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Molecular Function

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Biological Process

External links

PDB	RCSB:8k24, PDBe:8k24, PDBj:8k24
PDBsum	8k24
PubMed
UniProt	F1D5W0

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