Structure of PDB 8dr1 Chain E Binding Site BS01
Receptor Information
>8dr1 Chain E (length=354) Species:
4932
(Saccharomyces cerevisiae) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKK
TRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSD
MGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDA
QAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEIST
ILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKS
SSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL
KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVM
CCLD
Ligand information
>8dr1 Chain I (length=19) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tttcgggggggccgggggg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8dr1
Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Resolution
2.14 Å
Binding residue
(original residue number in PDB)
N103 K337
Binding residue
(residue number reindexed from 1)
N103 K337
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003689
DNA clamp loader activity
GO:0005515
protein binding
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
Biological Process
GO:0000077
DNA damage checkpoint signaling
GO:0006260
DNA replication
GO:0006261
DNA-templated DNA replication
GO:0006271
DNA strand elongation involved in DNA replication
GO:0006272
leading strand elongation
GO:0006281
DNA repair
GO:0007062
sister chromatid cohesion
GO:0007064
mitotic sister chromatid cohesion
GO:0090618
DNA clamp unloading
Cellular Component
GO:0005634
nucleus
GO:0005663
DNA replication factor C complex
GO:0031389
Rad17 RFC-like complex
GO:0031390
Ctf18 RFC-like complex
GO:0031391
Elg1 RFC-like complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8dr1
,
PDBe:8dr1
,
PDBj:8dr1
PDBsum
8dr1
PubMed
35939393
UniProt
P38251
|RFC5_YEAST Replication factor C subunit 5 (Gene Name=RFC5)
[
Back to BioLiP
]