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Receptor Information

>8bz8 Chain E (length=599) Species: 1639 (Listeria monocytogenes) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

DIKISVVVPTYNTELEGLKNLMASIDKQTMNPDEYELVFVDDGSTTDTYE
RLQEFAETRPNMTVKQIENSGWGSRPRNIATKMAKGEYILYLDHDDTVFP
ETFERVYNFGKENNLDVVSGKEVRTNGWSWGWKQFSENNPHAEEMGIECL
LPMTPHKFYKREFLLENDITFDDGARVLWEAVYFNSKAFIHGAKVGILAD
YPTYYWIATFGRDPHEKWNQINKLFNFFKDNIKEQRDLDFMLTHWYRSRV
LGILGQWLLKNNNERIDIEFNYAKKLAEELIPAYISENLDKNNQVKDYLL
RQGDLDSLKKLAQIDAGITALSYVEDAYFKEDKLFFKTSTKMTYEDKEDF
FIEKTADRMERILPEEIKSKLPKEFFDYSDDLAEFTYEPSIKGRNSRATW
KIDGSTSNVEVVNKKANLYKIEGEMSFSVQINDYILDAADKKQPWDIATR
FTGLGYTSHRALTIGKILIKTALINNKTMIVYKNASGLISLDVGSSVRSI
VEDSGVKREQILIDKTSGKVTIPLNEIHVFGESLIEGNAELKPVGISDAD
PINVKAKLIGEANKARVEVLLGDEKLSGEYHLVTNIQGKKDKQQIKITL

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

8bz8 Chain E Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8bz8 Crystal structure of the L. monocytogenes RmlT D198A variant in complex with TDP-rhamnose
Resolution	2.52 Å
Binding residue (original residue number in PDB)	Y347 D370
Binding residue (residue number reindexed from 1)	Y323 D346
Annotation score	4

Enzyme Commision number

	Molecular Function
GO:0016740	transferase activity
GO:0016757	glycosyltransferase activity
GO:0046872	metal ion binding

PDB	RCSB:8bz8, PDBe:8bz8, PDBj:8bz8
PDBsum	8bz8
PubMed
UniProt	A0A401AAP7

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Structure of PDB 8bz8 Chain E Binding Site BS01