Structure of PDB 7z6f Chain E Binding Site BS01

Receptor Information

>7z6f Chain E (length=581) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

IKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYA
LRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINP
RARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIE
LAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSWKMG
QNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDL
RMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSD
RRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVL
LAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQQ
RVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQIT
NRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDS
LINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFS
QPAVRPIYSLGIDTWWYDVNKAAKLPSASKQ

Ligand information

>7z6f Chain A (length=12) Species: 562 (Escherichia coli) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

VLGEPRYAFNFN

Receptor-Ligand Complex Structure

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Structure summary

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PDB	7z6f Crystal structure of the substrate-binding protein YejA in complex with peptide fragment
Resolution	1.65 Å
Binding residue (original residue number in PDB)	R69 L72 P76 Y98 V148 P149 Q150 F151 V154 Y155 D179 S182 S185 L186 T471 M474 R475 S494 D495 S507 T508 Y509
Binding residue (residue number reindexed from 1)	R48 L51 P55 Y77 V127 P128 Q129 F130 V133 Y134 D158 S161 S164 L165 T450 M453 R454 S473 D474 S486 T487 Y488

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0015421	ABC-type oligopeptide transporter activity
GO:1904680	peptide transmembrane transporter activity

	Biological Process
GO:0006857	oligopeptide transport
GO:0015833	peptide transport
GO:0035672	oligopeptide transmembrane transport
GO:0042884	microcin transport
GO:0055085	transmembrane transport

	Cellular Component
GO:0016020	membrane
GO:0030288	outer membrane-bounded periplasmic space
GO:0043190	ATP-binding cassette (ABC) transporter complex
GO:0055052	ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing

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Molecular Function

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Cellular Component

External links

PDB	RCSB:7z6f, PDBe:7z6f, PDBj:7z6f
PDBsum	7z6f
PubMed
UniProt	P33913\|YEJA_ECOLI Uncharacterized protein YejA (Gene Name=yejA)

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