Structure of PDB 6upl Chain E Binding Site BS01
Receptor Information
>6upl Chain E (length=99) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS
SAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Ligand information
>6upl Chain I (length=79) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tcgtagacagctctagcaccgcttaaacgcacgtacgcgctgtcccccgc
gttttaaccgccaaggggattactcccta
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6upl
FACT caught in the act of manipulating the nucleosome.
Resolution
7.4 Å
Binding residue
(original residue number in PDB)
P38 R40 P43 G44 R63 K64 L65 P66 R83
Binding residue
(residue number reindexed from 1)
P2 R4 P7 G8 R27 K28 L29 P30 R47
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0045296
cadherin binding
GO:0046982
protein heterodimerization activity
Biological Process
GO:0006325
chromatin organization
GO:0006334
nucleosome assembly
GO:0010467
gene expression
GO:0032200
telomere organization
GO:0040029
epigenetic regulation of gene expression
Cellular Component
GO:0000786
nucleosome
GO:0005576
extracellular region
GO:0005634
nucleus
GO:0005654
nucleoplasm
GO:0005694
chromosome
GO:0016020
membrane
GO:0032991
protein-containing complex
GO:0070062
extracellular exosome
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6upl
,
PDBe:6upl
,
PDBj:6upl
PDBsum
6upl
PubMed
31775157
UniProt
P68431
|H31_HUMAN Histone H3.1 (Gene Name=H3C1)
[
Back to BioLiP
]