Structure of PDB 6u8k Chain E Binding Site BS01

Receptor Information
>6u8k Chain E (length=215) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIY
SASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSSSPYTFG
QGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWK
VDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQ
GLSSPVTKSFNRGEC
Ligand information
>6u8k Chain B (length=68) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gggucucgcggaaccggugaguacaccggaauccaggaaacuggauuugg
gcgugcccccgcgagacc
.<<<<<<<<<<..<<<<<<....>>>>>><<<<<<<....>>>>>>>.<<
<<..>>>>>>>>>>>>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6u8k Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation.
Resolution2.75 Å
Binding residue
(original residue number in PDB)		Y92 S93 Y97
Binding residue
(residue number reindexed from 1)		Y92 S93 Y97
Binding affinityPDBbind-CN: Kd=37nM
External links