Structure of PDB 6pef Chain E Binding Site BS01

Receptor Information
>6pef Chain E (length=210) Species: 9544 (Macaca mulatta) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLTQPPSVSAAPGQKVTISCSGSSSNIGINYVAWYQQVPGTAPKLLIYDS
NKRPSGVSDRFSGSKSGISASLAITGLQTGDEADYYCGVWDTSLTAYIFG
AGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVEVAW
KADGSAVNAGVETTKPSKQSNNKYAASSYLSLTSDQWKSHKSYSCQVTHE
GSTVEKTVAP
Ligand information
>6pef Chain F (length=8) Species: 11676 (Human immunodeficiency virus 1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
AVGIGAVF
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6pef Modular recognition of antigens provides a mechanism that improves vaccine-elicited antibody-class frequencies
Resolution2.004 Å
Binding residue
(original residue number in PDB)		N32 Y33 Y37 W92 T94 Y99
Binding residue
(residue number reindexed from 1)		N30 Y31 Y35 W90 T92 Y97
External links