Structure of PDB 6lwr Chain E Binding Site BS01

Receptor Information
>6lwr Chain E (length=260) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASA
RGKELRLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRF
YTAPPGPRLALCFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRN
LADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEAL
NPDLLELCHSVPKEVVQLGGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTI
WFQGDPGPLA
Ligand information
Receptor-Ligand Complex Structure
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PDB6lwr DNA repair glycosylase hNEIL1 triages damaged bases via competing interaction modes.
Resolution2.9 Å
Binding residue
(original residue number in PDB)		R118 Y263 R277
Binding residue
(residue number reindexed from 1)		R117 Y234 R248
Enzymatic activity
Enzyme Commision number 3.2.2.-
4.2.99.18: DNA-(apurinic or apyrimidinic site) lyase.
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003684 damaged DNA binding
GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0008270 zinc ion binding
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0019104 DNA N-glycosylase activity
Biological Process
GO:0006284 base-excision repair

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Molecular Function
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Biological Process
External links
PDB RCSB:6lwr, PDBe:6lwr, PDBj:6lwr
PDBsum6lwr
PubMed34226550
UniProtQ96FI4|NEIL1_HUMAN Endonuclease 8-like 1 (Gene Name=NEIL1)

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