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Structure of PDB 6lcl Chain E Binding Site BS01

Receptor Information
>6lcl Chain E (length=479) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHMRLNLGGAEVFLRAEGLEEAPGGVRLWGREVRVFPPFPAKGFFRHGW
QSWSLAAWVDPAQAPTPLLPEARRPQADDPFLLEAGAWWGSGVGALRGPD
GRALLLGALDLGARVLGREDLLLGRYAGKGGAWFLAYGPEEEVFAAYARL
LPRRLSGRPPRVWCSWYSFYTRIGEDLLLRVLDEVAAFSFEVFQIDDGWQ
RALGDWEPNDRFPRGMAFLAERIRERGLRAGLWFAPFLVTADSPLFQKRP
DWVLRDGEGRPVRAGFNWGRPLYALDAGNEEVVEWAADLVRKALAWGYDY
LKLDFLYAAALPGAEGEARYRKAMARLREAAGEAYLLFCGAPVLASLGLA
DGLRVGPDVAPYWDNEERSFWLADPTGPGLRNALRSTLHRLWLMENVHVD
PDVVYFRTRFNLLSPEEMRLQEALAHFTGFKATSDPPSWLLPEEKGRLEA
FLAREVPVRRLGPYRFRVGEEEVDYAPLL
 
 
IndexError		Python 3.6.8: /usr/bin/python3
Sun May 4 22:25:28 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1463     title=pdb2title(pdbid)
   1464     if bs.startswith("BS"):
=> 1465         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1466     else:
   1467         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6lcl', asym_id = 'E', bs = 'BS01', title = 'Crystal Structure of alpha-Galactosidase from Th... into Hexamer Assembly and Substrate Specificity.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6lcl', asym_id='E', bs='BS01', title='Crystal Structure of alpha-Galactosidase from Th... into Hexamer Assembly and Substrate Specificity.')
    953                 p=subprocess.Popen(cmd,shell=True,stdout=subprocess.PIPE)
    954                 stdout,stderr=p.communicate()
=>  955                 line     =stdout.decode().splitlines()[0]
    956                 items    =line.split('\t')
    957                 rhea     ='\n'.join(["RHEA:"+r for r in items[2].split(',')])
line = '6lcl\tE\tGLA\t5', stdout = b'', stdout.decode = <built-in method decode of bytes object>, ).splitlines undefined

IndexError: list index out of range
      args = ('list index out of range',)
      with_traceback = <built-in method with_traceback of IndexError object>