Structure of PDB 6cpo Chain E Binding Site BS01
Receptor Information
>6cpo Chain E (length=190) Species:
9606
(Homo sapiens) [
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GDTRPRFLWQPKRECHFFNGTERVRFLDRYFYNQEESVRFDSDVGEFRAV
TELGRPDAEYWNSQKDILEQARAAVDTYCRHNYGVGESFTVQRRVQPKVT
VYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLNGQEEKAGMVSTGLIQN
GDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
Ligand information
>6cpo Chain F (length=13) Species:
11706
(HIV-1 M:B_HXB2R) [
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RFYKTLRAEQASQ
Receptor-Ligand Complex Structure
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PDB
6cpo
CD4+T cell-mediated HLA class II cross-restriction in HIV controllers.
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
R13 F26 P56 D57 Y60 W61 I67 Y78 H81 N82 V85
Binding residue
(residue number reindexed from 1)
R13 F26 P56 D57 Y60 W61 I67 Y78 H81 N82 V85
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0006955
immune response
GO:0019882
antigen processing and presentation
Cellular Component
GO:0016020
membrane
GO:0042613
MHC class II protein complex
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6cpo
,
PDBe:6cpo
,
PDBj:6cpo
PDBsum
6cpo
PubMed
29884618
UniProt
P01911
|DRB1_HUMAN HLA class II histocompatibility antigen, DRB1 beta chain (Gene Name=HLA-DRB1)
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