Structure of PDB 5v3j Chain E Binding Site BS01

Receptor Information
>5v3j Chain E (length=277) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHR
VHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQ
LSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKG
FISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKC
KECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSG
EKPYECKECGKTFGRGSELSRHQKIHT
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5v3j DNA Conformation Induces Adaptable Binding by Tandem Zinc Finger Proteins.
Resolution2.064 Å
Binding residue
(original residue number in PDB)
L408 R411 R430 H433 R436 H437 I440 R457 Y458 Q461 K510 H517 R520 H521 S523 V524 K538 F540 R541 R542 E545 R548 H549 F568 E573 R576 H577 V580 R585 K594 R598 E601 K622 R626 E629 R632
Binding residue
(residue number reindexed from 1)
L47 R50 R69 H72 R75 H76 I79 R96 Y97 Q100 K149 H156 R159 H160 S162 V163 K177 F179 R180 R181 E184 R187 H188 F207 E212 R215 H216 V219 R224 K233 R237 E240 K261 R265 E268 R271
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5v3j, PDBe:5v3j, PDBj:5v3j
PDBsum5v3j
PubMed29551271
UniProtE9PYI1|ZN568_MOUSE Zinc finger protein 568 (Gene Name=Znf568)

[Back to BioLiP]