Structure of PDB 5bpu Chain E Binding Site BS01
Receptor Information
>5bpu Chain E (length=100) Species:
9606
(Homo sapiens) [
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SDPRRCMRHHYVDSISHPLYKCSSKMVLLARCEGHCSQASRSEPLVSFST
VLKQPFRSSCHCCRPQTSKLKALRLRCSGGMRLTATYRYILSCHCEECNS
Ligand information
>5bpu Chain I (length=4) Species:
32630
(synthetic construct) [
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EEEE
Receptor-Ligand Complex Structure
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PDB
5bpu
Structure and functional properties of Norrin mimic Wnt for signalling with Frizzled4, Lrp5/6, and proteoglycan.
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
R38 R41 S125 H127
Binding residue
(residue number reindexed from 1)
R5 R8 S92 H94
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005109
frizzled binding
GO:0005125
cytokine activity
GO:0005515
protein binding
GO:0042803
protein homodimerization activity
Biological Process
GO:0000278
mitotic cell cycle
GO:0000320
re-entry into mitotic cell cycle
GO:0001508
action potential
GO:0001525
angiogenesis
GO:0001666
response to hypoxia
GO:0001890
placenta development
GO:0001974
blood vessel remodeling
GO:0002088
lens development in camera-type eye
GO:0003406
retinal pigment epithelium development
GO:0003407
neural retina development
GO:0006099
tricarboxylic acid cycle
GO:0006366
transcription by RNA polymerase II
GO:0006544
glycine metabolic process
GO:0006622
protein targeting to lysosome
GO:0006749
glutathione metabolic process
GO:0006954
inflammatory response
GO:0007033
vacuole organization
GO:0007179
transforming growth factor beta receptor signaling pathway
GO:0007224
smoothened signaling pathway
GO:0007399
nervous system development
GO:0007601
visual perception
GO:0008104
protein localization
GO:0008283
cell population proliferation
GO:0009069
serine family amino acid metabolic process
GO:0010467
gene expression
GO:0010842
retina layer formation
GO:0014004
microglia differentiation
GO:0016055
Wnt signaling pathway
GO:0016358
dendrite development
GO:0016567
protein ubiquitination
GO:0021554
optic nerve development
GO:0030182
neuron differentiation
GO:0031290
retinal ganglion cell axon guidance
GO:0035426
extracellular matrix-cell signaling
GO:0035640
exploration behavior
GO:0045446
endothelial cell differentiation
GO:0045893
positive regulation of DNA-templated transcription
GO:0046697
decidualization
GO:0048678
response to axon injury
GO:0051091
positive regulation of DNA-binding transcription factor activity
GO:0051402
neuron apoptotic process
GO:0051897
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
GO:0060041
retina development in camera-type eye
GO:0060042
retina morphogenesis in camera-type eye
GO:0060070
canonical Wnt signaling pathway
GO:0060221
retinal rod cell differentiation
GO:0060856
establishment of blood-brain barrier
GO:0060996
dendritic spine development
GO:0061298
retina vasculature development in camera-type eye
GO:0061299
retina vasculature morphogenesis in camera-type eye
GO:0061304
retinal blood vessel morphogenesis
GO:0061518
microglial cell proliferation
GO:0070086
ubiquitin-dependent endocytosis
GO:0071456
cellular response to hypoxia
GO:0097601
retina blood vessel maintenance
GO:0110135
Norrin signaling pathway
GO:1904390
cone retinal bipolar cell differentiation
GO:1990963
establishment of blood-retinal barrier
Cellular Component
GO:0005576
extracellular region
GO:0005615
extracellular space
GO:0009986
cell surface
GO:0062023
collagen-containing extracellular matrix
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:5bpu
,
PDBe:5bpu
,
PDBj:5bpu
PDBsum
5bpu
PubMed
26158506
UniProt
Q00604
|NDP_HUMAN Norrin (Gene Name=NDP)
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