Structure of PDB 4udk Chain E Binding Site BS01

Receptor Information
>4udk Chain E (length=321) Species: 155900 (uncultured organism) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IIIPWEERPAGCKDVLWRSVANPIIPRDLLPTSNSIFNSAVVPFGDGFAG
VFRCDDTSRRMRLHVGFSKDAINWNIKEEPLKFQCDDEEIGTWVYGYDPR
VCFIEDRYYVTWCNGYHGPTIGVAYTFDFETFHQLENAFIPFNRNGVLFP
RKINGRFAMLSRPSDNGHTPFGDIFYSESPDMEFWGRHRHVMSPAAFEVS
AWQCTKIGAGPIPVETPEGWLLIYHGVLHSCNGYVYSFGSALLDLDEPWK
VKFRSGPYLLAPREPYECMGDVPNVCFPCAALHDNETGRIAIYYGCADTV
TGLAFGYIPEIIEFTKRTSII
Ligand information
Ligand IDPO4
InChIInChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChIKeyNBIIXXVUZAFLBC-UHFFFAOYSA-K
SMILES
SoftwareSMILES
CACTVS 3.341[O-][P]([O-])([O-])=O
ACDLabs 10.04[O-]P([O-])([O-])=O
OpenEye OEToolkits 1.5.0[O-]P(=O)([O-])[O-]
FormulaO4 P
NamePHOSPHATE ION
ChEMBL
DrugBankDB14523
ZINC
PDB chain4udk Chain E Residue 328 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4udk Structural Bases for N-Glycan Processing by Mannoside Phosphorylase.
Resolution1.76 Å
Binding residue
(original residue number in PDB)		R150 N151 R168 K212 H231 Y242
Binding residue
(residue number reindexed from 1)		R144 N145 R162 K206 H225 Y236
Annotation score3
Enzymatic activity
Enzyme Commision number 2.4.1.-
Gene Ontology
Molecular Function
GO:0016740 transferase activity

View graph for
Molecular Function
External links
PDB RCSB:4udk, PDBe:4udk, PDBj:4udk
PDBsum4udk
PubMed26057673
UniProtD9ZDQ9

[Back to BioLiP]