Structure of PDB 4djd Chain E Binding Site BS01

Receptor Information
>4djd Chain E (length=441) Species: 1525 (Moorella thermoacetica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PLTGLEIYKQLPKKNCGECGTPTCLAFAMNLASGKASLDSCPYVSDAARE
ALDAAAAPPIAKVVLGAGPTAVEMGDETELFRHDKRFYHETAIAIQVSDN
LSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADDPAAFKAAVASVA
AATQLNLVLMADDPDVLKEALAGVADRKPLLYAATGANYEAMTALAKENN
CPLAVYGNGLEELAELVDKIVALGHKQLVLDPGARETSRAIADFTQIRRL
AIKKRFRSFGYPIIALTTAANPLDEVLQAVNYVTKYASLVVLRTDAKEHL
LPLLSWRQNLYTDPQVPIRVEEKLNEIGAVNENSPVYVTTNFSLTYYSVE
GEIESTKIPSYLLSVDTDGLSVLTAYADGKFEAEKIAAVMKKVDLDNKVK
RHRIIIPGAVAVLKGKLEDLTGWEVIVGPREASGIVAFARA
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain4djd Chain E Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4djd Visualizing molecular juggling within a B12-dependent methyltransferase complex.
Resolution2.38 Å
Binding residue
(original residue number in PDB)		N16 C17 G18 E19 C20 C25 C42
Binding residue
(residue number reindexed from 1)		N15 C16 G17 E18 C19 C24 C41
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0005515 protein binding
GO:0008168 methyltransferase activity
GO:0031419 cobalamin binding
GO:0046872 metal ion binding
GO:0051536 iron-sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0015977 carbon fixation
GO:0044237 cellular metabolic process
GO:0046356 acetyl-CoA catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:4djd, PDBe:4djd, PDBj:4djd
PDBsum4djd
PubMed22419154
UniProtQ07340|ACSC_MOOTH Corrinoid/iron-sulfur protein large subunit (Gene Name=acsC)

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