Structure of PDB 4csf Chain E Binding Site BS01
Receptor Information
>4csf Chain E (length=249) Species:
11590
(Toscana virus) [
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ENYRDIALAFLDESADSGTINAWVNEFAYEGFDPKRIVQLVKERGTAKGR
DWKKDVKMMIVLNLVRGNKPEAMMKKMSEKGASIVANLISVYQLKEGNPG
RDTITLSRVSAAFVPWTVQALRVLSESLPVSGTTMDAIAGVTYPRAMMHP
SFAGIIDLDLPNGAGATIADAHGLFMIEFSKTINPSLRTKQANEVAATFE
KPNMAAMSGRFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAKVG
Ligand information
>4csf Chain e (length=9) [
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uguguuucu
.........
Receptor-Ligand Complex Structure
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PDB
4csf
Structural Insights Into RNA Encapsidation and Helical Assembly of the Toscana Virus Nucleoprotein.
Resolution
2.598 Å
Binding residue
(original residue number in PDB)
Y32 F35 N71 G100 N101 P102 S110 R111 T185 I186 P188 R191 T201 K204 P205 M207 A208 A209 S211
Binding residue
(residue number reindexed from 1)
Y29 F32 N68 G97 N98 P99 S107 R108 T182 I183 P185 R188 T198 K201 P202 M204 A205 A206 S208
Binding affinity
PDBbind-CN
: Kd=260nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
Cellular Component
GO:0019013
viral nucleocapsid
GO:0019029
helical viral capsid
GO:0030430
host cell cytoplasm
GO:0042025
host cell nucleus
GO:0044172
host cell endoplasmic reticulum-Golgi intermediate compartment
GO:0044177
host cell Golgi apparatus
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
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Cellular Component
External links
PDB
RCSB:4csf
,
PDBe:4csf
,
PDBj:4csf
PDBsum
4csf
PubMed
24688060
UniProt
P21701
|NCAP_TOSV Nucleoprotein (Gene Name=N)
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