Structure of PDB 1zbb Chain E Binding Site BS01

Receptor Information
>1zbb Chain E (length=97) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSA
VMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Ligand information
>1zbb Chain I (length=347) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acttacatgcacaggatgtaacctgcagatactaccaaaagtgtatttgg
aaactgctccatcaaaaggcatgttcagctggattccagctgaacatgcc
ttttgatggagcagtttccaaatacacttttggtagtatctgcaggtgat
tctccagggcggccagtacttacatgcacaggatgtaacctgcagatact
accaaaagtgtatttggaaactgctccatcaaaaggcatgttcagctgga
ttccagctgaacatgccttttgatggagcagtttccaaatacacttttgg
tagtatctgcaggtgattctccagacttacatgcgcatgtaagtgca
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1zbb X-ray structure of a tetranucleosome and its implications for the chromatin fibre.
Resolution9.0 Å
Binding residue
(original residue number in PDB)
R42 R63 R72 R83 F84 Q85 R116 V117 T118
Binding residue
(residue number reindexed from 1)
R4 R25 R34 R45 F46 Q47 R78 V79 T80
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:1zbb, PDBe:1zbb, PDBj:1zbb
PDBsum1zbb
PubMed16001076
UniProtP84233|H32_XENLA Histone H3.2

[Back to BioLiP]