Structure of PDB 1wmg Chain E Binding Site BS01

Receptor Information
>1wmg Chain E (length=88) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YAFKIPLSIRQKICSSLDAPNSRGNDWRLLAQKLSMDRYLNYFATKASPT
GVILDLWEARQQDDGDLNSLASALEEMGKSEMLVAMAT
Ligand information
Ligand IDSO3
InChIInChI=1S/H2O3S/c1-4(2)3/h(H2,1,2,3)/p-2
InChIKeyLSNNMFCWUKXFEE-UHFFFAOYSA-L
SMILES
SoftwareSMILES
CACTVS 3.341[O-][S]([O-])=O
OpenEye OEToolkits 1.5.0[O-]S(=O)[O-]
ACDLabs 10.04[O-]S([O-])=O
FormulaO3 S
NameSULFITE ION
ChEMBL
DrugBank
ZINC
PDB chain1wmg Chain E Residue 1005 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1wmg Structure of the UNC5H2 death domain
Resolution2.1 Å
Binding residue
(original residue number in PDB)
S888 D890 R891
Binding residue
(residue number reindexed from 1)
S35 D37 R38
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005042 netrin receptor activity
Biological Process
GO:0007165 signal transduction
GO:0038007 netrin-activated signaling pathway
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1wmg, PDBe:1wmg, PDBj:1wmg
PDBsum1wmg
PubMed17139086
UniProtQ8K1S3|UNC5B_MOUSE Netrin receptor UNC5B (Gene Name=Unc5b)

[Back to BioLiP]