Structure of PDB 1nzb Chain E Binding Site BS01
Receptor Information
>1nzb Chain E (length=321) Species:
10678
(Punavirus P1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPED
VRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRI
RKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNT
LLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKL
VERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHR
LIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNI
VMNYIRNLDSETGAMVRLLED
Ligand information
>1nzb Chain G (length=37) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cgataacutcgtataatgtatgctatacgaagttatc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1nzb
Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
S38 H40 T41 M97 A175 K244 R259 E262 K276 R282 Y283 S287 G288 H289
Binding residue
(residue number reindexed from 1)
S18 H20 T21 M77 A155 K224 R239 E242 K256 R262 Y263 S267 G268 H269
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0006310
DNA recombination
GO:0015074
DNA integration
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1nzb
,
PDBe:1nzb
,
PDBj:1nzb
PDBsum
1nzb
PubMed
12954782
UniProt
P06956
|RECR_BPP1 Recombinase cre (Gene Name=cre)
[
Back to BioLiP
]