Structure of PDB 8rdw Chain Dm Binding Site BS01 |
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| >8rdw Chain iN (length=1503)
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aaacugaagaguuugaucauggcucagauugaacgcuggcggcaggcuua
acacaugcaagucgagcgguaacaggagaagcuugcuucuugcugacgag
cggcggacgggugaguaauacuuaggaaucuaccuaguagugggggauag
cucggggaaacucgaauuaauaccgcauacgaccuacgggagaaaggggg
cucucgcuauuagaugagccuaagucggauuagcuagauggugggguaaa
ggccuaccauggcgacgaucuguagcuggucugagaggaugaucagccac
accgggacugagacacggcccggacuccuacgggaggcagcaguggggaa
uauuggacaaugggggcaacccugauccagccaugccgcgugugugaaga
aggccuuuugguuguaaagcacuuuaagcagugaagaagacuccgugguu
aauacccacggacgaugacauuagcugcagaauaagcaccggcuaacucu
gugccagcagccgcgguaauacagagggugcaagcguuaaucggaauuac
ugggcguaaagggagcguagguggcucgauaagucagaugugaaaucccc
gggcuuaaccugggaacugcaucugauacuguugagcuagaguaugugag
aggaagguagaauuccagguguagcggugaaaugcguagagaucuggagg
aauaccgauggcgaaggcagccuucuggcauaauacugacacugaggcuc
gaaagcguggguagcaaacaggauuagauacccugguaguccacgccgua
aacgaugucuacuagucguuggguccggacuuagugacgcagcuaacgca
auaaguagaccgccuggggaguacggccgcaagguuaaaacucaaaugaa
uugacgggggcccgcacaagcgguggagcauguuguuuaauucgaugcaa
cgcgaagaaccuuaccuggucuugacauaucuagaauccugcagagaugc
gggagugccuucgggaauuagaauacaggugcugcauggcugucgucagc
ucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuguc
cuuaguuaccagggaacucuaaggauacugccagugacaaacuggaggaa
ggcggggacgacgucaagucaucauggcccuuacgaccagggcuacacac
gugcuacaaugguagguacagagggcagcuacacagcgaugugaugcgaa
ucucaaaaagccuaucguaguccggauuggagucugcaacucgacuccau
gaaguaggaaucgcuaguaaucgcggaucagaaugccgcggugaauacgu
ucccgggccuuguacacaccgcccgucacaccaugggaguugauugcacc
agaaguggauagcuuaaccuucgggaaggcguucaccacggugugguuga
ugacuggggugaagucguaacaagguagccguaggggaaccugcggcugg
auc |
........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<....
.<<<.<<<..<<<..<<.<<..<<<<<<..........>>>.>>>>>..>
>>>>......<<.......<<<<<<<..<<...<<<<<<<<<.<<....<
.<<<<......>>>>.>.....>>.>......<<....>>.....<<<<.
.>>>>>>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<<.....
..>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>
.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.....
....<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<.....
.<<<<....>>>>.....>>>>...<.<<<<<.........<<<<<<<..
.....>>>>>>>...........>>>>>....>..<<<<<(((...<<<<
<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>........
..<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<
<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<..
.<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>.
..........<<....>>.>>>>>>>..>>>.>>>>>...>>>...>>>>
....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>....
......<<<<<<..<<<<<<<<<<<<>>>>>>>>>>>>...<<..))>>.
....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).
]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<.<<......<<......
..>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>
>>>>...<<<..>>>..>>>>>.>>.<<<.<<<..<<<<<<.......<<
<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<<<<
<<<<<...<<..>>....>>>>>>>>....<<<<<.....>>>>>.....
...>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>..>>
>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>...
.>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>.
...>.....>>>>>>....<<<<<<<.........>>>>>>>......>>
...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<
....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>
>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>..
... |
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| PDB | 8rdw A new family of bacterial ribosome hibernation factors |
| Resolution | 2.74 Å |
Binding residue
(original residue number in PDB) | A2 R3 P7 K8 L9 K10 R13 R14 K22 S23 K26 K31 T32 K33 K34 R37 P39 G40 Q41 H42 Y52 L56 R57 K59 Q60 K63 L69 E70 R71 Q72 N75 R82 T111 A113 E114 R116 Q117 S120 H121 R122 R131 R136 V137 N138 I139 S141 I142 Q159 E209 S212 K213 |
Binding residue
(residue number reindexed from 1) | A1 R2 P6 K7 L8 K9 R12 R13 K21 S22 K25 K30 T31 K32 K33 R36 P38 G39 Q40 H41 Y51 L55 R56 K58 Q59 K62 L68 E69 R70 Q71 N74 R81 T110 A112 E113 R115 Q116 S119 H120 R121 R130 R135 V136 N137 I138 S140 I141 Q158 E208 S211 K212 |
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| Enzyme Commision number |
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