Structure of PDB 8rd8 Chain Dm Binding Site BS01 |
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| >8rd8 Chain iN (length=1503)
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aaacugaagaguuugaucauggcucagauugaacgcuggcggcaggcuua
acacaugcaagucgagcgguaacaggagaagcuugcuucuugcugacgag
cggcggacgggugaguaauacuuaggaaucuaccuaguagugggggauag
cucggggaaacucgaauuaauaccgcauacgaccuacgggagaaaggggg
cucucgcuauuagaugagccuaagucggauuagcuagauggugggguaaa
ggccuaccauggcgacgaucuguagcuggucugagaggaugaucagccac
accgggacugagacacggcccggacuccuacgggaggcagcaguggggaa
uauuggacaaugggggcaacccugauccagccaugccgcgugugugaaga
aggccuuuugguuguaaagcacuuuaagcagugaagaagacuccgugguu
aauacccacggacgaugacauuagcugcagaauaagcaccggcuaacucu
gugccagcagccgcgguaauacagagggugcaagcguuaaucggaauuac
ugggcguaaagggagcguagguggcucgauaagucagaugugaaaucccc
gggcuuaaccugggaacugcaucugauacuguugagcuagaguaugugag
aggaagguagaauuccagguguagcggugaaaugcguagagaucuggagg
aauaccgauggcgaaggcagccuucuggcauaauacugacacugaggcuc
gaaagcguggguagcaaacaggauuagauacccugguaguccacgccgua
aacgaugucuacuagucguuggguccggacuuagugacgcagcuaacgca
auaaguagaccgccuggggaguacggccgcaagguuaaaacucaaaugaa
uugacgggggcccgcacaagcgguggagcauguuguuuaauucgaugcaa
cgcgaagaaccuuaccuggucuugacauaucuagaauccugcagagaugc
gggagugccuucgggaauuagaauacaggugcugcauggcugucgucagc
ucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuguc
cuuaguuaccagggaacucuaaggauacugccagugacaaacuggaggaa
ggcggggacgacgucaagucaucauggcccuuacgaccagggcuacacac
gugcuacaaugguagguacagagggcagcuacacagcgaugugaugcgaa
ucucaaaaagccuaucguaguccggauuggagucugcaacucgacuccau
gaaguaggaaucgcuaguaaucgcggaucagaaugccgcggugaauacgu
ucccgggccuuguacacaccgcccgucacaccaugggaguugauugcacc
agaaguggauagcuuaaccuucgggaaggcguucaccacggugugguuga
ugacuggggugaagucguaacaagguagccguaggggaaccugcggcugg
auc |
........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<....
.<<<.<<<..<<<..<<.<<..<<<<<<..........>>>.>>>>>..>
>>>>......<<.......<<<<<<<..<<...<<<<<<<<<.<<....<
.<<<<<....>>>>>.>.....>>.>......<<....>>.....<<<<.
.>>>>>>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<<.....
..>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>
.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.....
....<<<...<<<<<....>>>>.>>>>..>>.>>>>>>..<<<<.....
.<<<<....>>>>.....>>>>...<.<<<<<.........<<<<<<<..
.....>>>>>>>...........>>>>>....>..<<<<<(((...<<<<
<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>........
..<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<
<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<..
.<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>.
..........<<....>>.>>>>>>>..>>>.>>>>>...>>>...>>>>
....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>....
......<<<<<<..<<<<<<<<<<<<>>>>>>>>>>>>...<<..))>>.
....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).
]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<.<<......<<......
..>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>
>>>>...<<<..>>>..>>>>>.>>.<<<.<<<..<<<<<<.......<<
<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<<<<
<<<<<...<<..>>....>>>>>>>>....<<<<<.....>>>>>.....
...>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>..>>
>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>...
.>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>.
...>.....>>>>>>....<<<<<<<.........>>>>>>>......>>
...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<
....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>
>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>..
... |
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| PDB | 8rd8 A new family of bacterial ribosome hibernation factors |
| Resolution | 2.62 Å |
Binding residue
(original residue number in PDB) | A2 R3 P7 K8 L9 K10 R13 R14 K22 S23 K31 T32 K33 K34 G40 Q41 H42 E51 Y52 A53 L56 R57 K59 Q60 K63 E70 R71 Q72 N75 R82 R84 T111 E114 R116 S120 H121 R122 R131 R136 V137 N138 I139 P140 S141 I142 E209 S212 K213 |
Binding residue
(residue number reindexed from 1) | A1 R2 P6 K7 L8 K9 R12 R13 K21 S22 K30 T31 K32 K33 G39 Q40 H41 E50 Y51 A52 L55 R56 K58 Q59 K62 E69 R70 Q71 N74 R81 R83 T110 E113 R115 S119 H120 R121 R130 R135 V136 N137 I138 P139 S140 I141 E208 S211 K212 |
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| Enzyme Commision number |
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