Structure of PDB 7zux Chain DY Binding Site BS01

Receptor Information
>7zux Chain DY (length=134) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SDAVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKAE
KDAVSVFGFRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVE
KASRQQRKQKKNRDKKIFGTGKRLAKKVARRNAD
Ligand information
>7zux Chain 2 (length=1769) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaucugguugauccugccaguagucauaugcuugucucaaagauuaagcc
augcaugucuaaguauaagcaauuuauacagugaaacugcgaauggcuca
uuaaaucaguuaucguuuauuugauaguuccuuuacuacaugguauaacu
gugguaauucuagagcuaauacaugcuuaaaaucucgacccuuuggaaga
gauguauuuauuagauaaaaaaucaaugucuucggacucuuugaugauuc
auaauaacuuuucgaaucgcauggccuugugcuggcgaugguucauucaa
auuucugcccuaucaacuuucgaugguaggauaguggccuaccaugguuu
caacggguaacggggaauaaggguucgauuccggagagggagccugagaa
acggcuaccacauccaaggaaggcagcaggcgcgcaaauuacccaauccu
aauucagggagguagugacaauaaauaacgauacagggcccauucggguc
uuguaauuggaaugaguacaauguaaauaccuuaacgaggaacaauugga
gggcaagucuggugccagcagccgcgguaauuccagcuccaauagcguau
auuaaaguuguugcaguuaaaaagcucguaguugaacuuugggcccgguu
ggccggucggauuuccaacggggccuccuucuggcuaaccuugagcuugg
cgaaccaggacuuuuacuuugaaaaaauuagaguguucaaagcaggcgua
uugcucgaauauauuagcauggaauaauagaauaggacguuugguucuau
uuuguugguuucuaggaccaucguaaugauuaauagggacggucgggggc
aucaguauucaauugucagaggugaaauucuuggauuuauugaagacuaa
cuacugcgaaagcauuugccaaggacguuuucauuaaucaagaacgaaag
uuaggggaucgaagaugaucagauaccgucguagucuuaaccauaaacua
ugccgacuagggaucgggugguguuuuuuuaaugacccacucggcaccuu
acgagaaaucaaagucuuuggguucuggggggaguauggucgcaaggcug
aaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggc
uuaauuugacucaacacggggaaacucaccagguccagacacaauaagga
uugacagauugagagcucuuucuugauuuugugggugguggugcauggcc
guucuuaguugguggagugauuugucugcuuaauugcgauaacgaacgag
accuuaaccuacuaaauaguggugcuagcauuugcugguuauccacuucu
uagagggacuaucgguuucaagccgauggaaguuugaggcaauaacaggu
cugugaugcccuuagacguucugggccgcacgcgcgcuacacugacggag
ccagcgagucuaaccuuggccgagaggucuugguaaucuugugaaacucc
gucgugcuggggauagagcauuguaauuauugcucuucaacgaggaauuc
cuaguaagcgcaagucaucagcuugcguugauuacgucccugcccuuugu
acacaccgcccgucgcuaguaccgauugaauggcuuagugaggccucagg
aucugcuuagagaagggggcaacuccaucucagagcggagaauuuggaca
aacuuggucauuuagaggaacuaaaagucguaacaagguuuccguaggug
aaccugcggaaggaucauu
...<<<<<.{.(((.>>>>><<<<.<<<<<<...<.<...<......<<<
.<<<..<<....<<....<<..........>>...>>.>>......<<..
......<<<..<<..<<....<<<..................<<....<<
.<<.......>>.>>.....>>.........<<<<<..<<....>>..>>
>>><.<.<<<<<<......(((..((.<.<....>.>.....<......>
.>>>>>>.>...>...<<<<..<<<.....>>>.>>>>....>>>...>>
>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>..
....>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<.......
...>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<
.....>>>..>>>..>....>.>.....<<<<<<<<<.<<<....>>>.>
>>>>>.>>>......<<..<...........>..>>.........<<<<<
((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>
>>>>.........<<<[[.....<.<<...<<<.<<.....<<<<<.<<<
<..............>>>>.>>>>>....<<<<<................
....>>>>>....<<<<<.<<.......<<...<.......>..<<<<..
.>>>>....>>......>>.>>..>>>.........<<...<<<<<<<<.
....))..))).>>>>>>>>..>>.....>>....<<<<<<.<<...<<<
<..<<..<<<<<<.<...<<<......>>>......>.>>>>>>..>>..
.....<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<
<<<<<<...<...<<<<.........>>>>...>>>>>>>>.........
.<<<.<<.<<<..<<<<<<<<.<<<........>>>>>>>>>>>..>>>.
..<<..]]>>...>>.....>>>.>>>.<<<......<<<<....>>>>.
...>>>...))).}<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<<<
......<<........>>..........<<<<<.<....<<<<<......
..<<.<<<........>>>.>>......>>>>>...<<.<<<..<<.<<<
<<<....<<<.<<<<......>>...<<<......>>>...>>.>>>...
.<<<<<.<<..<<<<..<<<<<.<<<<<<....>>>>>>...>>>>>..>
>>>.>>...<<<<<<<.....>>>>>>>......>>>>>....>>>.>>>
.....>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<<<<<<
......<<.....<<..<<<<....>>>>..>>....>>.......>>>>
>>>...........<<<<<<..........>>>>>>..........>>>>
>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>
.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<.<<..<..
.<<<<<<<.<<<<.<<<<....>>>>.>>>>.>>>>>>>...>..>>.>.
.>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<.
.>>>>>>>>>>........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7zux Structural basis for clearing of ribosome collisions by the RQT complex.
Resolution2.5 Å
Binding residue
(original residue number in PDB)		R8 T9 R10 K11 V12 S14 A33 N34 S36 K37 Y48 G59 R61 T62 Q63 F64 G65 Y89 R93 K102 R105 R108 K109 Q110 K112 N113 K116 K117 F119 G120 T121 R124 K127 K128 R131 R132
Binding residue
(residue number reindexed from 1)		R7 T8 R9 K10 V11 S13 A32 N33 S35 K36 Y47 G58 R60 T61 Q62 F63 G64 Y88 R92 K101 R104 R107 K108 Q109 K111 N112 K115 K116 F118 G119 T120 R123 K126 K127 R130 R131
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7zux, PDBe:7zux, PDBj:7zux
PDBsum7zux
PubMed36801861
UniProtP0CX31|RS24A_YEAST Small ribosomal subunit protein eS24A (Gene Name=RPS24A)

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