Structure of PDB 6hiv Chain DY Binding Site BS01

Receptor Information
>6hiv Chain DY (length=154) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NTFLTSSVATPPISVIRTGPKWWADPERMVRQKLMYFTLGVDQLPLRRTA
VIQRDLQRFHMCKPPPRVGDSTGYKRSRAAQLNTWYRRIQYQEYHMQHLF
TRHVWGLLRVYPGNTTKIQGKADDGYVGYDSVPFHRYNRAPLPFPARELY
ERRK
Ligand information
>6hiv Chain CA (length=621) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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.................<<<.(...<<<<<.....<<..).>>.......
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..>>>>>>>>>..........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6hiv Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Resolution7.8 Å
Binding residue
(original residue number in PDB)
T14 S15 V17 S23 R26 P29 H69 P73 R76 S140 V141 R145 R148
Binding residue
(residue number reindexed from 1)
T5 S6 V8 S14 R17 P20 H60 P64 R67 S131 V132 R136 R139
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit
GO:0020023 kinetoplast

View graph for
Cellular Component
External links
PDB RCSB:6hiv, PDBe:6hiv, PDBj:6hiv
PDBsum6hiv
PubMed30213880
UniProtQ57YD4

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