Structure of PDB 6hiy Chain DR Binding Site BS01

Receptor Information
>6hiy Chain DR (length=251) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SRRFRYNTKFPALVSYNKLPWEVVNHETPQFHMHVAPHYEQLLTLAASSP
VPHIIGSKHIDVPREHRLRLLPGMLYLLDGDTLPGEFTINRVLDPTALQY
YGRLSSQIVTVEAVRMLVPDDLRLLCNCITFKGPLHLPVAPYASLASLRG
ASSNCFTLYHFVRPNRPPKELQLEKYYIHAPCVAPLSEFASNSDERGNWR
PRLQAPKRTRRATPLPAYRPPQSYLMGLAERLAVVPGGCFGRRSLMWGHW
F
Ligand information
>6hiy Chain CA (length=478) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
uauuuauaaaaauauauuuuuuuuuuuu
....................<<<.......<<<<..............<.
..>..........................................<<...
.<<...<<<.......>>>..>>.......>>........<<....>>..
..................................................
.................<<<.(...<<<<<.....<<..).>>.......
>>>>>>>>.......>>>>............<..................
.<.......>.....................>............<<<...
.>>>................<......>..>>>..<<.............
.>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
<<<<<....>>>>>>>>>..........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6hiy Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Resolution3.27 Å
Binding residue
(original residue number in PDB)		S10 R11 R12 F13 R14 Y15 T17 K18 A21 Y25 R250 R261
Binding residue
(residue number reindexed from 1)		S1 R2 R3 F4 R5 Y6 T8 K9 A12 Y16 R231 R242
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit

View graph for
Cellular Component
External links
PDB RCSB:6hiy, PDBe:6hiy, PDBj:6hiy
PDBsum6hiy
PubMed30213880
UniProtQ57UA2

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