Structure of PDB 6hiy Chain DQ Binding Site BS01

Receptor Information
>6hiy Chain DQ (length=256) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ERGLYFPINHRIVDHRIAPGVTVEETDVQSRYRRELRTNFATGETRQTIA
PPWSARERPTHFFSLRLPSRNSVTLRVKEMHNHLLFSHQQCAPMLVSPTK
LHITLGVMTIPENSREELVKNIQQSMSETFACVQPLQLRFRGLGTFDFGR
VLFIRVVPEADFGRLERAVCDIRRRVGGVLGVDLKGNPHDSYVPHVTVAK
IRPNQRQQLGDTIPQSLWADYQHHDFGDVTLSTVDLCRMKGSPDGYYHTE
GAVHLS
Ligand information
>6hiy Chain CA (length=478) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
uauuuauaaaaauauauuuuuuuuuuuu
....................<<<.......<<<<..............<.
..>..........................................<<...
.<<...<<<.......>>>..>>.......>>........<<....>>..
..................................................
.................<<<.(...<<<<<.....<<..).>>.......
>>>>>>>>.......>>>>............<..................
.<.......>.....................>............<<<...
.>>>................<......>..>>>..<<.............
.>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
<<<<<....>>>>>>>>>..........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6hiy Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Resolution3.27 Å
Binding residue
(original residue number in PDB)		E13 R14 N21 H22 H27 P31 S42 R43 R45 R49
Binding residue
(residue number reindexed from 1)		E1 R2 N9 H10 H15 P19 S30 R31 R33 R37
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0034237 protein kinase A regulatory subunit binding
Biological Process
GO:0010738 regulation of protein kinase A signaling
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6hiy, PDBe:6hiy, PDBj:6hiy
PDBsum6hiy
PubMed30213880
UniProtQ382E8

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