Structure of PDB 6sgb Chain DJ Binding Site BS01

Receptor Information
>6sgb Chain DJ (length=308) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YHWHYNLPQGMERPHSVNRTFAAPFQSNHSLVNKYRGVWIEFDMHPAFSV
ALEPQLRKLPRGRTLPKTPAEEVIADYTALAPLVDDEKTRDLWLAKVFQH
CAFQRCGGAMELWERYCHQRFTAEGATAKPPLSLVKSVLFYCNKTDNSGW
RALFDRCLKDGWNYTPLFDTAQWSFMLKSIGRMGDEDGVRAVLEEMLDVQ
ADLDRVEARSVVIALNAVTNADVYEFVKKYLFNFGERKVKFLRTTYSDLR
GHGAGKLRIPLKENDNMYYHVCWHSSIRSPRQPNAKIDDIVKDKIEKWKA
EGLLPEDY
Ligand information
>6sgb Chain CA (length=609) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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.<<...<<<.......>>>..>>........>........<<....>>..
...>>>...........................................>
>>.........................<<<..<<.........>>....>
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.......>>>>..................<<<<<<<........<<<...
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.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6sgb Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Resolution3.3 Å
Binding residue
(original residue number in PDB)
F52 Q53 N55 H56 S57 V59 K61 R63 D231 R232 E234 A235 R264 K265
Binding residue
(residue number reindexed from 1)
F25 Q26 N28 H29 S30 V32 K34 R36 D204 R205 E207 A208 R237 K238
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit

View graph for
Cellular Component
External links
PDB RCSB:6sgb, PDBe:6sgb, PDBj:6sgb
PDBsum6sgb
PubMed31515389
UniProtQ584U8

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