Structure of PDB 6hiv Chain DF Binding Site BS01 |
| >6hiv Chain DF (length=590) Species: 5702 (Trypanosoma brucei brucei)
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SVSGVFSKGRGIGHEATTSILRYIPRARVPWQPSRFGRENLTAADMARLW
SRGRYRDGPGNYNSGYCTERTHVLEENTVSIIPRRELEKYMPDITIGPKA
LVTPVSLMNARNGHRVTHDLLHSYDPHIGRLGKPAVVDHDNITVEDPNRV
GLNAATLDCRGRIYRWLRRGPFFQVDNYFRRSVKLNRDGTLPTDFVHEAP
LMRKIIRLAHRGHLKAACEEYRRVTTVPPVEVYRALTACCVPGAKLADAV
SIFEDGDSKLFYVSRDGEVLHNLMRCAIAARHRARIMWVYNVMRGRFYEN
VVVRAEVDLIWRYRIAMIALEYLLDHECAEEAAAIYSYLVEEELLRCDVH
VRVGLHMREAIAAGKPITLNNDVMNATSLVRDATAVAPEVARELQRRHAQ
TLQNNAVEAVGAGSAPWSILGPLTAIGPTAEDTMVWLQQHYGDVDVMSIM
RWARFRKGKDLMAKDRPQYLARAAAWIELLSKRNREMEEVPLTYMRKSKP
LVLDTNSNVRVAWQTPLMRSGGPPRLLAREEGYVFHHSNSSRFVEETYRH
PGESLQSRYLALQPLHTEVSAKEDFQRLYYQAQKHHKQQE |
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| >6hiv Chain CA (length=621)
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gcccaccaauuuuuauaauaaaaauaacgugcaguaauuaauauauuuau
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....................<<<.......<<<<..............<.
..>..........................................<<...
.<<...<<<.......>>>..>>.......>>........<<....>>..
..................................................
.................<<<.(...<<<<<.....<<..).>>.......
>>>>>>>>.......>>>>............<..................
.<.......>.....................>............<<<...
.>>>................<......>..>>>..<<.............
.<<<<<............................................
..................................................
.....................>>>>>..................>>....
<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<<<<<<..
..>>>>>>>>>.......... |
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| PDB | 6hiv Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes. |
| Resolution | 7.8 Å |
Binding residue
(original residue number in PDB) | G10 R11 G12 I13 L22 I25 R27 R29 Q33 S35 R36 F37 N41 R49 L50 R53 G54 Y56 R57 N62 H128 R131 G133 K134 P135 A156 D159 R161 G162 R166 D177 R181 R182 K185 R188 S259 K260 R297 F298 Y299 |
Binding residue
(residue number reindexed from 1) | G9 R10 G11 I12 L21 I24 R26 R28 Q32 S34 R35 F36 N40 R48 L49 R52 G53 Y55 R56 N61 H127 R130 G132 K133 P134 A155 D158 R160 G161 R165 D176 R180 R181 K184 R187 S258 K259 R296 F297 Y298 |
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