Structure of PDB 8col Chain DDD Binding Site BS01

Receptor Information
>8col Chain DDD (length=335) Species: 29449 (Rhizobium etli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTNPVTVEVTRGLLVESRHRGAVAVVDGDGKLFFSLGDIDTAVFPRSACK
AMQALPLVESGAADAYGFGDKELALACASHNGEEEHVALAASMLSRAGRN
VEALECGAHWSMNQKVLIQQARSLDAPTALHNNCSGKHAGFICACCHRDI
DPKGYVGYEHPLQVEIRAVMERLTGAVLGAESCGTDGCSIPTYAMPLRNL
AHGFARMATGTGLEPLRAKASRRLIEACMAEPFYVAGSGRACTKLMQIAP
GRIFVKTGAEGVFCAAIPEKGIGISLKSEDGATRAAEAMVAATLARFFET
EETVHAALMAFAAMPMRNWNGIHVGDIRATSVFSA
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8col Chain DDD Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8col Rhizobium etli has two L-asparaginases with low sequence identity but similar structure and catalytic center.
Resolution2.0 Å
Binding residue
(original residue number in PDB)		C134 K137 C188
Binding residue
(residue number reindexed from 1)		C134 K137 C188
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8col, PDBe:8col, PDBj:8col
PDBsum8col
PubMed37494066
UniProtQ2KB35

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