Structure of PDB 8c23 Chain DDD Binding Site BS01

Receptor Information
>8c23 Chain DDD (length=135) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TVGAVALDLDGNLAAATSTGGTTNKLPGRVGDSPLVGAGCYANNASVAVS
CTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLI
AIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYRE
Ligand information
Ligand IDGLY
InChIInChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)
InChIKeyDHMQDGOQFOQNFH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C(=O)O)N
CACTVS 3.341NCC(O)=O
ACDLabs 10.04O=C(O)CN
FormulaC2 H5 N O2
NameGLYCINE
ChEMBLCHEMBL773
DrugBankDB00145
ZINCZINC000004658552
PDB chain8c23 Chain DDD Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8c23 The effects of nature-inspired amino acid substitutions on structural and biochemical properties of the E. coli L-asparaginase EcAIII.
Resolution1.842 Å
Binding residue
(original residue number in PDB)		R207 D210 G231 G233
Binding residue
(residue number reindexed from 1)		R29 D32 G53 G55
Annotation score4
Enzymatic activity
Enzyme Commision number 3.4.19.5: beta-aspartyl-peptidase.
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity

View graph for
Molecular Function
External links
PDB RCSB:8c23, PDBe:8c23, PDBj:8c23
PDBsum8c23
PubMed37095066
UniProtP37595|IAAA_ECOLI Isoaspartyl peptidase (Gene Name=iaaA)

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