Structure of PDB 4v9k Chain DC Binding Site BS01

Receptor Information
>4v9k Chain DC (length=228) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PKHGKRYRALLEKVDPNKVYTIDEAARLVKELATAKFDETVEVHAKLGID
PRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEII
QKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIG
EIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHK
PEGAKGTFLRSVYVTTTMGPSVRINPHS
Ligand information
>4v9k Chain CW (length=77) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggcuacguagcucaguugguuagagcacaucacucauaaugaugggguca
cagguucgaaucccgucguagccacca
<<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<
<.<<.......>>.>>>>>>>>>....
Receptor-Ligand Complex Structure
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PDB4v9k Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation.
Resolution3.5 Å
Binding residue
(original residue number in PDB)		R53 R54 S55 P134
Binding residue
(residue number reindexed from 1)		R52 R53 S54 P133
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
GO:0006417 regulation of translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:4v9k, PDBe:4v9k, PDBj:4v9k
PDBsum4v9k
PubMed23812722
UniProtQ72GV9|RL1_THET2 Large ribosomal subunit protein uL1 (Gene Name=rplA)

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