Structure of PDB 7tbk Chain D2 Binding Site BS01

Receptor Information

>7tbk Chain D2 (length=621) Species: 9606 (Homo sapiens)

SSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWT
MVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVF
GNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYC
MRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHY
RRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDP
QDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFR
MERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRL
LMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFD
MILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDL
AKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISA
NKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERV
AAFRNFSDEIRHNLSEVLLATMNILFTQFKRDRDSQLRSQARTLITFAGM
IPYRTSGDTNARLVQMEVLMN

Ligand information

>7tbk Chain E2 (length=8) Species: 9606 (Homo sapiens)

APPVRSIY

Receptor-Ligand Complex Structure

Structure summary

• PDB: 7tbk Architecture of the linker-scaffold in the nuclear pore.
• Resolution: 37.0 Å
• Binding residue (original residue number in PDB): Y269 N402 D408 K409 T410 E411 Y413 Y448 H452 F453 N456 L461
• Binding residue (residue number reindexed from 1): Y94 N227 D233 K234 T235 E236 Y238 Y267 H271 F272 N275 L280

Gene Ontology

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UnboundLocalError

Python 3.6.8: /usr/bin/python3 Mon Nov 25 22:51:16 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1435     title=pdb2title(pdbid)

   1436     if bs.startswith("BS"):

=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)

   1438     else:

   1439         if lig3:

pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7tbk', asym_id = 'D2', bs = 'BS01', title = 'Architecture of the linker-scaffold in the nuclear pore.'

 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7tbk', asym_id='D2', bs='BS01', title='Architecture of the linker-scaffold in the nuclear pore.')

   1295         display_ec(ec,csaOrig,csaRenu)

   1296     if go:

=> 1297         display_go(go,uniprot,pdbid,asym_id)

   1298     return pubmed,uniprot

   1299 

global display_go = <function display_go>, go = '0005643,0017056', uniprot = '', pdbid = '7tbk', asym_id = 'D2'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005643,0017056', uniprot='', pdbid='7tbk', asym_id='D2')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>