Structure of PDB 8xqw Chain D Binding Site BS01

Receptor Information
>8xqw Chain D (length=1539) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TLQNERINKQLNAFLKTYKFEKLITNYKKMQSFFGTYYFLQKLLSKYLDV
SLYFVFTQLNQKTFLSYWLLPVAGLALLTPTLLTLTGQSNDLISIKYCFN
NLYNYISNKTALSTKNLFLFSLPYLKAISPLYSKFMIDHSLKFITPKTTL
KLLQHKLNKSPHSNSRPLNHYNQALKLINGYEQYKNNQNITKLKLNLTKT
TVPFKTLIKKNGHLSVVSNANLLTGKRLNSYLIYVNQNLKKFIQLNLTSL
RGSKQFLNSLTILFKHQKMFKKKTLKAHKWHSDTQGIFRKHEESSLSTRL
HIQKKRKAKKQRLETRRQKKRTRFFPRPVWLRSRMFLNFLTERNKYYLNQ
NLRDIKIKANYNNFTMFRDFWVWSYNNTQTNAFNQNLWWLLPSIPTASKN
QIALIRLNWALNKTNINTFTDYSKRNNLWTTQKLRNQSKNNNIFSKKIIS
KVKQKKQKLNYMTSYLNVQSEHNVKIFHNSWWTHLNIKNLVNNQDSEFIN
SAIIKSINNKTSSEKETMQLLLMSSSILLHLCAIISLVSISQVRCFVKFH
LILLYKLSNVYNAILNQLSNKLQKNLGFLVEWSSDFITIIPENVDIYIWN
VFSKIYRTIPLSFISTTLGQKMVAFPILLSLSHLLHRRILYLFDTLFSTI
TQPDTDLIARQEKGTLFWDIWADFLVTAADYYNEQNSLIENISNDFDNLN
KIKPYFEAYFSLNRWSVNQFITYQSWHSHLFIDYHPPKTFSHIPALKYNS
ILQQPIGSLVCQIYSGLFNKQISKNILLVNPKTTSNNLVDYNVLLIQALA
GETEMKIITDNAQRYALVNRGFAIGIKLLREVFDAIALNTPCIFLLEDIH
AIGERRPNGSFKEDFFGSQRDEVHEKNQVVYQLTRHAITHYKKPFKGDYS
LAIPTNLYVTDLFLKLPTQSISNLTNVENHNLSIKNKIQHNKNSYLQLTQ
TSPFSVLLLKEEKRLKPNKIVEELPWTSLPGEQLATKPRTSYSVRAKVAM
LAELSLSNLSAKLDMITDLLVIIDSVRSNKGFVVFATTDIPHVLDPALRR
PGRLDETICLPNIHTSNILNFTKNYEIFKSAKDTSNFGKKIILNEMQNLT
KREGVLTMNLKDYNILLNQVYFAKSLNFALISHSKKLKELNVSKKSFKKK
YKDKAIIYYEVGKFVLNYFLNNQLTQDITIFGNDFLNLKTINYLSLYNSK
NKILLQLMLIFGGKISQLLSSKNLVKSLKQASIGMPLGQTHLLPKALSVL
AKPMIFSDGYNNQNLKTATTLLLSFIHKRYLYRKNLIVPKLLSFADGNIL
DEPPSPPFSSLLIPAKRFENYKRFFRDTLTGDKMGQRKSQITLLEKLQYH
MQLRSIKQLNATFSSNAALTSQKLDTLMSLSTNNLLQNPTNINWYYQNRI
LKRHGQYLTNQWWNGQLSEHNAETVFLSDIDWRSSLDVLLDFPDTDQYYN
PKRRRWLLNNGSWNFWFNFDKLYSEEIVTTWILESLIQTYKYLHKNTELL
DFVTNKFITLGYIAPENANLQSELLSTKEIILTNSFKRF
Ligand information
Ligand IDA1LXL
InChIInChI=1S/C29H50O/c1-7-21(19(2)3)9-8-20(4)25-12-13-26-24-11-10-22-18-23(30)14-16-28(22,5)27(24)15-17-29(25,26)6/h10,19-21,23-27,30H,7-9,11-18H2,1-6H3/t20-,21+,23+,24+,25-,26+,27+,28+,29-/m0/s1
InChIKeyKZJWDPNRJALLNS-USLLMGQYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CC[C@H](CC[C@H](C)[C@@H]1CC[C@H]2[C@]1(CC[C@@H]3[C@@H]2CC=C4[C@]3(CC[C@H](C4)O)C)C)C(C)C
CACTVS 3.385CC[CH](CC[CH](C)[CH]1CC[CH]2[CH]3CC=C4C[CH](O)CC[C]4(C)[CH]3CC[C]12C)C(C)C
CACTVS 3.385CC[C@H](CC[C@H](C)[C@@H]1CC[C@@H]2[C@H]3CC=C4C[C@H](O)CC[C@@]4(C)[C@@H]3CC[C@@]12C)C(C)C
OpenEye OEToolkits 2.0.7CCC(CCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C)C(C)C
FormulaC29 H50 O
Name(3~{R},8~{R},9~{R},10~{S},13~{S},14~{R},17~{S})-17-[(2~{S},5~{R})-5-ethyl-6-methyl-heptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-ol;
(3~{R},8~{R},9~{R},10~{S},13~{S},14~{R},17~{S})-17-[(2~{S},5~{R})-5-ethyl-6-methyl-heptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-ol
ChEMBL
DrugBank
ZINC
PDB chain8xqw Chain P Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8xqw Conservation and specialization of the Ycf2-FtsHi chloroplast protein import motor in green algae.
Resolution2.9 Å
Binding residue
(original residue number in PDB)
N736 I737
Binding residue
(residue number reindexed from 1)
N189 I190
Annotation score1
External links