Structure of PDB 8wh5 Chain D Binding Site BS01

Receptor Information
>8wh5 Chain D (length=89) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNK
KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Ligand information
>8wh5 Chain J (length=133) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atctgacacgtgcctggagactagggagtaatccccttgggcggttaaac
gcgggggacagcgcgtacgtgcgtttaagcggtgctagagctgtctacga
ccaattgagcggcctcggcaccgggattctcga
Receptor-Ligand Complex Structure
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PDB8wh5 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation.
Resolution3.58 Å
Binding residue
(original residue number in PDB)		S80 S81 T113
Binding residue
(residue number reindexed from 1)		S20 S21 T53
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005730 nucleolus
GO:0005829 cytosol
GO:0009534 chloroplast thylakoid
GO:0009570 chloroplast stroma

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Molecular Function
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Cellular Component
External links
PDB RCSB:8wh5, PDBe:8wh5, PDBj:8wh5
PDBsum8wh5
PubMed38413824
UniProtO23629|H2B6_ARATH Histone H2B.6 (Gene Name=H2B)

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