Structure of PDB 8vfx Chain D Binding Site BS01

Receptor Information
>8vfx Chain D (length=95) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASR
LAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
Ligand information
>8vfx Chain I (length=158) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
tctgtcagcagggcactgtacttgctgataccagggaatgtttgttctta
aataccatcattccggacgtgtttgccttggccagttttccatgtacatg
cagaaagaagtttggactgatcaatacagtcctctgcctttaaagcaata
ggaaagat
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8vfx Cryo-EM structure of 186bp ALBN1 nucleosome aided by scFv
Resolution2.65 Å
Binding residue
(original residue number in PDB)		R33 K34 S36 I39 Y40
Binding residue
(residue number reindexed from 1)		R4 K5 S7 I10 Y11
External links
PDB RCSB:8vfx, PDBe:8vfx, PDBj:8vfx
PDBsum8vfx
PubMed39121853
UniProtP06899|H2B1J_HUMAN Histone H2B type 1-J (Gene Name=H2BC11)

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