Structure of PDB 8qzx Chain D Binding Site BS01

Receptor Information
>8qzx Chain D (length=328) Species: 5722 (Trichomonas vaginalis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TPLVKGYVPDDFDFDKMLEQMKYCGFQATNLGLAIDQINEMLHYDYEPKL
FGLGGGVEGVKYKPRACKIFLGITSNLISSGMRDYIRFLVKHALVDVVVC
TAGGIEEDFIKCLAPTHMFHDGHDLRKRGLNRIGNLIVPNKNYCLFEDWI
MPILDKCLEEQNTQGTKWTPSKLIHRLGLEINNEDSVWYWAAKNNIPVYS
PALTDGSIGDMIYFHSYNNPGLVLDLVEDIRDMNNEPLWATKTGCIILGG
GVVKHHIMNANLYRNGADFVVYVNTAHDFDGSDSGARPDEAVSWGAISLE
AKPVKVYAEVTLVLPLLVAGSFSKFLAE
Ligand information
Ligand IDNAD
InChIInChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKeyBAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
SoftwareSMILES
CACTVS 3.341NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
FormulaC21 H27 N7 O14 P2
NameNICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBLCHEMBL1234613
DrugBankDB14128
ZINC
PDB chain8qzx Chain C Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8qzx Structural characterization of the (deoxy)hypusination in Trichomonas vaginalis questions the bifunctionality of deoxyhypusine synthase.
Resolution3.01 Å
Binding residue
(original residue number in PDB)		H290 D315 S317 D318 S319
Binding residue
(residue number reindexed from 1)		H255 D280 S282 D283 S284
Annotation score1
Gene Ontology
Molecular Function
GO:0034038 deoxyhypusine synthase activity
Biological Process
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8qzx, PDBe:8qzx, PDBj:8qzx
PDBsum8qzx
PubMed38923395
UniProtF1AQF9

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